BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026E02SP1|AL428554
(557 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1776 962 0.0
>3x_Contig1776
Length = 26138
Score = 962 bits (474), Expect = 0.0
Identities = 527/557 (94%)
Strand = Plus / Minus
Query: 1 aatccaaaacaaatttctttttgttccagccgctacgtgaaaagaagaagctctaaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12247 aatccaaaacaaatttctttttgttccagccgctacgtgaaaagaagaagctctaaaggc 12188
Query: 61 ctttcaattacttacttgatcactacagttaaaatagcccgtataaggaaaaatgactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12187 ctttcaattacttacttgatcactacagttaaaatagcccgtataaggaaaaatgactat 12128
Query: 121 tcaaaatttttatgtttttccaagtttttttttttcttcagttttthhwttcaaaacttc 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 12127 tcaaaatttttatgtttttccaagtttttttttttcttcagttttttttttcaaaacttc 12068
Query: 181 tcacatttactttgtataaatatgtcatgggtacgattaahagtaaatcccccccattct 240
||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||
Sbjct: 12067 tcacatttactttgtataaatatgttatgggtacgattaatagtaaattttttccattct 12008
Query: 241 tgtyacttcgattcasaacacaattatctgtctgtgcagtgtgtgttcaagtttgayttc 300
||| ||||||||||| ||||||||||| ||| |||||||||||||||||||||||| ||
Sbjct: 12007 tgttacttcgattcagaacacaattatttgtttgtgcagtgtgtgttcaagtttgatttt 11948
Query: 301 caatattcagttcaggtcataaggacgtccatacagaagcatctytsbgtkggatatcat 360
|||||||||||||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct: 11947 caatattcagttcaggtcataaggacgtccatacagaagcatctttttgttggatatcat 11888
Query: 361 tbcanaatggctcaaagcactttatktgtsctgcctccttccccaagamgtatcttggct 420
| || |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||
Sbjct: 11887 ttcataatggctcaaagcactttatttgttctgcctccttccccaagaagtatcttggct 11828
Query: 421 aaagcyttggctaagtacttcaaggtagacgtcaacgttgttgatgttactgctgctgav 480
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11827 aaagctttggctaagtacttcaaggtagacgtcaacgttgttgatgttactgctgctgaa 11768
Query: 481 aatvaggvattcaccagcaacttcccattgcataagacaccagctttcattggcgaagac 540
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11767 aataaggaattcaccagcaacttcccattgcataagacaccagctttcattggcgaagac 11708
Query: 541 ggtttcmagttgcacga 557
|||||| ||||||||||
Sbjct: 11707 ggtttcaagttgcacga 11691
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.714 1.33
Gapped
Lambda K H
1.41 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9224
Number of Sequences: 1807
Number of extensions: 9224
Number of successful extensions: 214
Number of sequences better than 1.0e-20: 1
length of query: 557
length of database: 10,358,551
effective HSP length: 16
effective length of query: 541
effective length of database: 10,329,639
effective search space: 5588334699
effective search space used: 5588334699
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)